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Publications

Publications

Lou, J., Low-Nam, S., Kerkvliet, J., and Hoppe, A. D., (2014) "Delivery of the CSF-1R to the lumen of macropinosomes promotes its destruction in macrophages." J. Cell Sci. (under revision). 

Sheng, Z., Ran Z., Wang, D., Hoppe, A. D., Simonson, R., Chakravarty, S., Hause, B.M., Li, F., "Genomic and Evolutionary Characterization of a Novel Influenza-C-like Virus from Swine." (2013, In Press, Epub ahead of print).Arch. Virol.  

Hoppe, A.D., Scott, B.L., Welliver, T.P., Straight, S.W., Swanson, J.A. 2013. N-Way FRET Microscopy of Multiple Protein-Protein Interactions in Live Cells. PLOS one. 8(6): e64760 

Lin, J. and Hoppe, A. D. (2013) "Uniform TIRF Illumination Enables Live Cell FRET Microscopy." Microscopy and Microanalysis. 19(2):350-9(Paper of the year) 

Hause B. M., Ducatez, M., Collin, E.A., Ran, Z., Lui, R., Sheng, Z., Armein, A., Kaplan, B., Chakravarty, S., Hoppe, A. D., Webby, R. J., Simonson, R. R., Li, F., (2013) "Isolation of a novel swine influenza virus from Oklahoma in 2011 which is distantly related to human influenza C viruses" PLoS Pathogens. 9(2): e1003176. doi:10.1371 

Brenner, M. H., Cai, D., Nichols, S. R., Straight, S. W., Hoppe A. D., Swanson, J.A., Ogilvie, J.P. (2012). Pulse Shaping Multiphoton FRET Microscopy. Proc. SPIE 1;8226. 

Baruah, M. Huntimer, E. D. Mahmoud, S. A. Hoppe, A. D. Halaweish, F. (2012) T Selective BODIPY Based Fluorescent Chemosensor for imaging Pb2+ ion in living cells.Tetrahedron Letters 53(33) 4273-4275.

Zhang, Y., Hoppe, A. D., Swanson, J. A., (2010).Coordination of Fc receptor signaling regulates cellular commitment to phagocytosis. Proc. Natl. Acad. Sci. 107(45): 19332-19337. 

Sun, X., Fontaine, J.M., Hoppe, A. D., Carra S., DeGuzman C., Martin J.L., Simon S., Vicart P., Welsh M.J., Landry J., Benndorf R., (2010).Abnormal interaction of motor neuropathy-associated mutant HspB8 (Hsp22) forms with the RNA helicase Ddx20 (gemin3). Cell Stress Chap. 15(5):567-82. 

Beemiller, P., Zhang, Y., Mohan, S., Levinsohn, J., Gaeta, I., Hoppe, A. D., Swanson, J. A., (2010). A Cdc42 Activation Cycle Coordinated by PI 3-kinase during Fc Receptor-mediated Phagocytosis.  Mol. Biol. Cell. 21, 3:470-480 
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Mehta, K., Hoppe, A.D., Kainkaryam, R., Woolf, P., Linderman, J. J., (2009). A computational approach to inferring cellular protein-binding affinities from quantitative fluorescence resonance energy transfer imaging. Proteomics 9:5371-5383.
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Hogue, I. B., Hoppe A. D., Ono, A. Quantitative FRET Microscopy Analysis of HIV-1 Gag-Gag Interaction: The Relative Contributions of CA and NC Domains and Membrane Binding. J. Virol. 83: 7322-7336.
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Yoshida, S., Hoppe, A. D., Araki, N., Swanson J. A., (2009). Sequential signaling in plasma-membrane domains during macropinosome formation in macrophages. J. Cell. Sci. 122:3250-3261.

Hoppe, A. D., Seveau, S., Swanson, J.A. (2009).  Live cell fluorescence microscopy to study microbial pathogenesis. Cell Microbio. 4:540-50.

Hoppe, A. D., Shorte, S. L., Swanson, J. A., Heintzmann, R. (2008.  3D-FRET Reconstruction Microscopy for Analysis of Dynamic Molecular Interactions in Live Cells. Biophys. J. 95:400-418
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Monastyrska, I., He, C., Geng, J., Hoppe, A.D., Zhijian, L., Klionsky, D.J., (2008). Arp2 Links Autophagic Machinery with the Actin Cytoskeleton.  Mol. Biol. Cell 19(5): 1962–1975
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Simon, S, Fontaine, J.M., Martin, J.L., Sun, X., Hoppe A.D., Welsh, M.J., Benndorf, R., Vicart, P. (2007). Myopathy-associated {alpha}B-crystallin Mutants: Abnormal phosphorylation, intracellular location and interactions with other small heat shock proteins. J Biol Chem. 2007 Nov 23;282(47):34276-87.
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Seveau S., Tham T. N., Payrastre B., Hoppe A. D., Swanson J. A., Cossart P. (2007).  A FRET analysis to unravel the role of cholesterol in Rac1 and PI 3-kinase activation in the InlB/Met signaling pathway.  Cell Microbiol9(3)790-80
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Cai, D. Hoppe, A. D., Swanson, J. A., Verhey, K. J., (2007) Kinesin-1 Structural Organization and Conformational Changes Revealed by FRET Stoichiometry in Live Cells, J Cell Biol. 176(1):51-63
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Fontaine, J.M., Sun, X., Hoppe, A. D., Simon, S., Vicart, P., Welsh, M. J., and Benndorf, R., (2006).   Abnormal small heat shock protein interactions involving neuropathy-associated HSP22 (HSPB8) mutants. FASEB J.,  20:2168-2170
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Hoppe, A.., Swanson, J.A., and Shorte, S.L. (2006). Three-dimensional FRET microscopy. Proc. SPIE6089, 608904. (invited, not peer reviewed)
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Beemiller, P., Hoppe, A. D., and Swanson, J. A., (2006).  A phosphatidylinositol-3-kinase-dependent signal transition regulates ARF1 and ARF6 during Fc receptor-mediated phagocytosis. PLoS Biology 4(6):e162.
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Shaughnessy, L., Hoppe, A. D., Christensen, K. A., and Swanson, J. A., (2006).  Membrane perforations inhibit lysosome fusion by altering pH and calcium in Listeria monocytogenes vacuoles. Cell. Microbiol. 8(5):781-92.
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Swanson J. A. and Hoppe, A. D. (2004). The Coordination of Signaling during Fc Receptor-mediated Phagocytosis. J Leuk. Biol. (76(6):1093-103).
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Mattheyses, A., Hoppe, A. D., and Axelrod, D. A. (2004). Polarized Fluorescence Resonance Energy Transfer Microscopy. Biophys J. 87, 2787-2797. 
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Hoppe, A. D. and Swanson, J. A. (2004). Cdc42, Rac1 and Rac2 Display Distinct Patterns of Activation during Phagocytosis. Mol. Biol. Cell. 15(8), 3509-19.
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Henry, R., Hoppe, A. D., Joshi, N., and Swanson, J. A. (2004). The Uniformity of Phagosome Maturation in Macrophages. J Cell Biol. 164(2), 185-94.

Hoppe, A.D., Christensen, K., and Swanson, J. A. (2002). Fluorescence Resonance Energy Transfer-Based Stoichiometry in Living Cells. Biophys J. 83, 3652-3664.
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Marlowe, R. L., Hoppe, A.D., Rupprecht, A., and Lee, S. A. (1999). Mediation of a phase transition in hyaluronate films by the counterions Li, Cs, Mg and Ca as observed by infrared spectroscopy, optical microscopy and optical birefringence. J Biomol Struct Dyn 17, 607-616.

Invited Book Chapters:

Hoppe, A. D. (2007) 'Quantitative FRET Microscopy in Live Cells' in Imaging Cellular and Molecular Biological Function, (eds. Frischknecht, F. and  Shorte, S. L) Pub. Springer-Verlog