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2019

Abbas, I and Hildreth, M 2019 Egg autofluorescence and options for detecting peanut agglutinin binding for the identification of Haemonchus contortus eggs in fecal samples Vet Parasitol 267: 69-74 DOI 10.1016/j.vetpar.2019.01.009

Hu, Y, Wu, XJ, Feng, WH, Li, F, Wang, Z, Qi, J and Du, YJ 2019 Cellular protein profiles altered by PRRSV infection of porcine monocytes-derived dendritic cells Vet Microbiol 228: 134-142 DOI 10.1016/j.vetmic.2018.11.016

Kafle, A, Garcia, K, Wang, XR, Pfeffer, PE, Strahan, GD and Bucking, H 2019 Nutrient demand and fungal access to resources control the carbon allocation to the symbiotic partners in tripartite interactions of Medicago truncatula Plant Cell Environ 42: 270-284 DOI 10.1111/pce.13359

Katwal, P, Thomas, M, Uprety, T, Hildreth, MB and Kaushik, RS 2019 Development and biochemical and immunological characterization of early passage and immortalized bovine intestinal epithelial cell lines from the ileum of a young calf Cytotechnology 71: 127-148 DOI 10.1007/s10616-018-0272-y

Li, WL, Zhang, QJ, Wang, SW, Langham, MA, Singh, D, Bowden, RL and Xu, SS 2019 Development and characterization of wheat-sea wheatgrass (Thinopyrum junceiforme) amphiploids for biotic stress resistance and abiotic stress tolerance Theor Appl Genet 132: 163-175 DOI 10.1007/s00122-018-3205-4

Maes, P, Amarasinghe, GK, Ayllon, MA, Basler, CF, Bavari, S, Blasdell, KR, Briese, T, Brown, PA, Bukreyev, A, Balkema-Buschmann, A, Buchholz, UJ, Chandran, K, Crozier, I, de Swart, RL, Dietzgen, RG, Dolnik, O, Domier, LL, Drexler, JF, Durrwald, R, Dundon, WG, Duprex, WP, Dye, JM, Easton, AJ, Fooks, AR, Formenty, PBH, Fouchier, RAM, Freitas-Astua, J, Ghedin, E, Griffiths, A, Hewson, R, Horie, M, Hurwitz, JL, Hyndman, TH, Jiang, D, Kobinger, GP, Kondo, H, Kurath, G, Kuzmin, IV, Lamb, RA, Lee, B, Leroy, EM, Li, J, Marzano, SYL, Muhlberger, E, Netesov, SV, Nowotny, N, Palacios, G, Palyi, B, Paweska, JT, Payne, SL, Rima, BK, Rota, P, Rubbenstroth, D, Simmonds, P, Smither, SJ, Song, QS, Song, T, Spann, K, Stenglein, MD, Stone, DM, Takada, A, Tesh, RB, Tomonaga, K, Tordo, N, Towner, JS, van den Hoogen, B, Vasilakis, N, Wahl, V, Walker, PJ, Wang, D, Wang, LF, Whitfield, AE, Williams, JV, Ye, GY, Zerbini, FM, Zhang, YZ and Kuhn, JH 2019 Taxonomy of the order Mononegavirales: second update 2018 Arch Virol 164: 1233-1244 DOI 10.1007/s00705-018-04126-4

Monier, B, McDermaid, A, Wang, CK, Zhao, J, Miller, A, Fennell, A and Ma, Q 2019 IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis Plos Comput Biol 15: DOI ARTN e100679210.1371/journal.pcbi.1006792

Monono, EM, Wiesenborn, DP, Vargas-Ramirez, JM and Zhou, R 2019 Preserving Juice from Industrial Beets Using Organic Acids T Asabe 62: 177-185 DOI 10.13031/trans.13051

Neupane, S, Schweitzer, SE, Neupane, A, Andersen, EJ, Fennell, A, Zhou, RB and Nepal, MP 2019 Identification and Characterization of Mitogen-Activated Protein Kinase (MAPK) Genes in Sunflower (Helianthus annuus L.) Plants-Basel 8: DOI ARTN 2810.3390/plants8020028

Qiu, YY, Tian, SN, Gu, LP, Hildreth, M and Zhou, RB 2019 Identification of surface polysaccharides in akinetes, heterocysts and vegetative cells of Anabaena cylindrica using fluorescein-labeled lectins Arch Microbiol 201: 17-25 DOI 10.1007/s00203-018-1565-4

Sarkar, A, Kobylkevich, BM, Graham, DM and Messerli, MA 2019 Electromigration of Cell Surface Macromolecules during Galvanotaxis Biophys J 116: 207a-208a DOI 10.1016/j.bpj.2018.11.1144

Sreenivasan, CC, Thomas, M, Antony, L, Wormstadt, T, Hildreth, MB, Wang, D, Hause, B, Francis, DH, Li, F and Kaushik, RS 2019 Development and characterization of swine primary respiratory epithelial cells and their susceptibility to infection by four influenza virus types Virology 528: 152-163 DOI 10.1016/j.virol.2018.12.016

Subramanian, S 2019 Little RNAs Go a Long Way: Long-Distance Signaling by MicroRNAs Mol Plant 12: 18-20 DOI 10.1016/j.molp.2018.12.001

Wang, Z, Yu, JS, Thomas, M, Sreenivasan, CC, Hause, B, Wang, D, Francis, DH, Kaushik, RS and Li, F 2019 Pre-exposure with influenza A virus A/WSN/1933(H1N1) resulted in viral shedding reduction from pigs challenged with either swine H1N1 or H3N2 virus Vet Microbiol 228: 26-31 DOI 10.1016/j.vetmic.2018.11.008

2018

Zhou, JN, Dudash, MR, Zimmer, EA and Fenster, CB 2018 Comparison of population genetic structures of the plant Silene stellata and its obligate pollinating seed predator moth Hadena ectypa Ann Bot-London 122: 593-604 DOI

Zhang, JP, Wang, XZ, Lu, YM, Bhusal, SJ, Song, QJ, Cregan, PB, Yen, Y, Brown, M and Jiang, GL 2018 Genome-wide Scan for Seed Composition Provides Insights into Soybean Quality Improvement and the Impacts of Domestication and Breeding Mol Plant 11: 460-472 DOI

Zangaro, CA, Patterson, R, Gibbons, WR and Woyengo, TA 2018 Enhancing the Nutritive Value of Corn Whole Stillage for Pigs via Pretreatment and Predigestion J Agr Food Chem 66: 9409-9417 DOI

Zahler, JD, Karki, B and Gibbons, WR 2018 Microbial Processing to Increase the Nutritional Value of Sorghum Mill Feed (Milo Hominy) J Am Oil Chem Soc 95: 1445-1452 DOI

Yetter, AP, Hagy, HM, Horath, MM, Lancaster, JD, Hine, CS, Smith, RV and Stafford, JD 2018 Mallard survival, movements, and habitat use during autumn in Illinois J Wildlife Manage 82: 182-191 DOI

Xu, Y, Wu, YJ and Wu, JX 2018 Capturing pair-wise epistatic effects associated with three agronomic traits in barley Genetica 146: 161-170 DOI

Wu, XJ, Qi, J, Cong, XY, Chen, L, Hu, Y, Yoo, DW, Wang, GS, Tian, FL, Li, F, Sun, WB, Chen, Z, Guo, LH, Wu, JQ, Li, J, Wang, JB, Zhao, XM and Du, YJ 2018 Establishment and Characterization of a High and Stable Porcine CD163-Expressing MARC-145 Cell Line Biomed Res Int DOI

Wani, SH, Tripathi, P, Zaid, A, Challa, GS, Kumar, A, Kumar, V, Upadhyay, J, Joshi, R and Bhatt, M 2018 Transcriptional regulation of osmotic stress tolerance in wheat (Triticum aestivum L.) Plant Mol Biol 97: 469-487 DOI

Wang, Z, Huang, B, Thomas, M, Sreenivasan, CC, Sheng, ZZ, Yu, JS, Hause, BM, Wang, D, Francis, DH, Kaushik, RS and Li, F 2018 Detailed mapping of the linear B Cell epitopes of the hemagglutinin (HA) protein of swine influenza virus Virology 522: 131-137 DOI

Wang, YF, Zhang, ZQ, Liu, HM, An, YR, Han, B, Wu, YJ, Chang, LQ, Hu, TM and Yang, PZ 2018 Overexpression of an alfalfa (Medicago sativa) gene, MsDUF, negatively impacted seed germination and response to osmotic stress in transgenic tobacco Plant Cell Tiss Org 132: 525-534 DOI

Wan, YM, Kang, GB, Sreenivasan, C, Daharsh, L, Zhang, JF, Fan, WJ, Wang, D, Moriyama, H, Li, F and Li, QS 2018 A DNA Vaccine Expressing Consensus Hemagglutinin-Esterase Fusion Protein Protected Guinea Pigs from Infection by Two Lineages of Influenza D Virus J Virol 92: DOI

Vincent, GP, Davis, JK, Wimberly, MC, Carlson, CD and Hildreth, MB 2018 Permethrin Susceptibility for the Vector Culex tarsalis and a Nuisance Mosquito Aedes vexans in an Area Endemic for West Nile Virus Biomed Res IntDOI

Thomas, M, Pierson, M, Uprety, T, Zhu, LH, Ran, ZG, Sreenivasan, CC, Wang, D, Hause, B, Francis, DH, Li, F and Kaushik, RS 2018 Comparison of Porcine Airway and Intestinal Epithelial Cell Lines for the Susceptibility and Expression of Pattern Recognition Receptors upon Influenza Virus Infection Viruses-Basel 10: DOI

Suzuki, N, Ghabrial, SA, Kim, KH, Pearson, M, Marzano, SYL, Yaegashi, H, Xie, JT, Guo, LH, Kondo, H, Koloniuk, I, Hillman, BI and Consortium, IR 2018 ICTV Virus Taxonomy Profile: Hypoviridae J Gen Virol 99: 615-616 DOI

Sreenivasan, CC, Jandhyala, SS, Luo, SS, Hause, BM, Thomas, M, Knudsen, DEB, Leslie-Steen, P, Clement, T, Reedy, SE, Chambers, TM, Christopher-Hennings, J, Nelson, E, Wang, D, Kaushik, RS and Li, F 2018 Phylogenetic Analysis and Characterization of a Sporadic Isolate of Equine Influenza A H3N8 from an Unvaccinated Horse in 2015 Viruses-Basel 10: DOI

Simpson, AG, Wagner, PJ, Wing, SL and Fenster, CB 2018 Binary-state speciation and extinction method is conditionally robust to realistic violations of its assumptions Bmc Evol Biol 18: DOI

Sheng, ZZ, Liu, RX, Yu, JS, Ran, ZG, Newkirk, SJ, An, WF, Li, F and Wang, D 2018 Identification and characterization of viral defective RNA genomes in influenza B virus J Gen Virol 99: 475-488 DOI

Rutter, MT, Roles, AJ and Fenster, CB 2018 Quantifying natural seasonal variation in mutation parameters with mutation accumulation lines Ecol Evol 8: 5575-5585 DOI

Romero, V and Pedersen, SC 2018 A new abnormality record in bats: a teratological condition or skull trauma due to tooth avulsion in Noctilio leporinus? Mammalia 82: 494-499 DOI

Robben, M, Thibault, E, Tran, M, Wu, YJ, Boe, A and Gonzalez-Hernandez, JL 2018 Transcriptome Analysis of the Heritable Salt Tolerance of Prairie Cordgrass (Spartina pectinata Link) Bioenerg Res 11: 106-114 DOI

Ralls, K, Ballou, JD, Dudash, MR, Eldridge, MDB, Fenster, CB, Lacy, RC, Sunnucks, P and Frankham, R 2018 Call for a Paradigm Shift in the Genetic Management of Fragmented Populations Conserv Lett 11: DOI

Pedersen SC, Larsen PA, Westra SA, van Norren E, Overman W, Kwiecinksi GG. & Genoways HH. 2018. Bats of Sint Eustatius, Caribbean Netherlands. Occ. Papers, Museum of Texas Tech University, 353:1-24. DOI

Pedersen SC, Kwiecinski GG, Genoways HH, Larsen RJ, Larsen PA, Phillips CJ, & Baker RJ. 2018. Bats of St. Lucia, Lesser Antilles. Special Publications, Museum of Texas Tech University, 69:1-61. DOI

Neupane, S, Ma, Q, Mathew, FM, Varenhorst, AJ, Andersen, EJ and Nepal, MP 2018 Evolutionary Divergence of TNL Disease-Resistant Proteins in Soybean (Glycine max) and Common Bean (Phaseolus vulgaris) Biochem Genet 56: 397-422 DOI

Neupane, S, Andersen, EJ, Neupane, A and Nepal, MP 2018 Genome-Wide Identification of NBS-Encoding Resistance Genes in Sunflower (Helianthus annuus L.) Genes-Basel 9: DOI

Nedland, H, Wollman, J, Sreenivasan, C, Quast, M, Singrey, A, Fawcett, L, Christopher-Hennings, J, Nelson, E, Kaushik, RS, Wang, D and Li, F 2018 Serological evidence for the co-circulation of two lineages of influenza D viruses in equine populations of the Midwest United States Zoonoses Public Hlth 65: E148-E154 DOI

NandaKafle, G, Christie, AA, Vilain, S and Brozel, VS 2018 Growth and Extended Survival of Escherichia coli O157:H7 in Soil Organic Matter Front Microbiol 9: DOI

Mochama, P, Jadhav, P, Neupane, A and Marzano, SYL 2018 Mycoviruses as Triggers and Targets of RNA Silencing in White Mold Fungus Sclerotinia sclerotiorum Viruses-Basel 10: DOI

Leischner, K, McCormack, LA, Britt, BC, Heiberger, G and Kattelmann, K 2018 The Healthfulness of Entrees and Students' Purchases in a University Campus Dining Environment Healthcare-Basel 6: DOI

Kwiecinski GG, Pedersen SC, Genoways HH, Larsen PA, Larsen RJ, Hoffman JD, Springer F. Phillips CJ, & Baker RJ. 2018. Bats of St. Vincent, Lesser Antilles. Special Publications, Museum of Texas Tech University, 68:1-68. DOI

Kennedy, DE and West, TP 2018 Effect of yeast extract addition to a mineral salts medium containing hydrolyzed plant xylan on fungal pullulan production Z Naturforsch C 73: 319-323 DOI

Johnson, TJ, Katuwal, S, Anderson, GA, Gu, LP, Zhou, RB and Gibbons, WR 2018 Photobioreactor Cultivation Strategies for Microalgae and Cyanobacteria Biotechnol Progr 34: 811-827 DOI

Hua, L, Challa, GS, Subramanian, S, Gu, XY and Li, WL 2018 Genome-Wide Identification of Drought Response Genes in Soybean Seedlings and Development of Biomarkers for Early Diagnoses Plant Mol Biol Rep 36: 350-362 DOI

Gyawali, A and Auger, D 2018 Evidence that the Allelic Segregation of starch branching enzyme 1 (sbe1) is the Source of a High Amylose QTL in Maize Crop Sci 58: 98-102 DOI

Gibbons, J, Gu, LP, Zhu, HL, Gibbons, W and Zhou, RB 2018 Identification of two genes required for heptadecane production in a N-2-fixing cyanobacterium Anabaena sp strain PCC 7120 Amb Express 8: DOI

Fisher, J, Gaillard, P, Fellbaum, CR, Subramanian, S and Smith, S 2018 Quantitative 3D imaging of cell level auxin and cytokinin response ratios in soybean roots and nodules Plant Cell Environ 41: 2080-2092 DOI

Fenster, CB and Dudash, MR 2018 Viewing Alternatives to Academia through Rose-Colored Glasses Bioscience 68: 473-473 DOI

Eldakak, M, Das, A, Zhuang, YB, Rohila, JS, Glover, K and Yen, Y 2018 A Quantitative Proteomics View on the Function of Qfhb1, a Major QTL for Fusarium Head Blight Resistance in Wheat Pathogens 7: DOI

Davis, JK, Vincent, GP, Hildreth, MB, Kightlinger, L, Carlson, C and Wimberly, MC 2018 Improving the prediction of arbovirus outbreaks: A comparison of climate-driven models for West Nile virus in an endemic region of the United States Acta Trop 185: 242-250 DOI

Cao, YH, Wang, XM, Gu, ZR, Fan, QH, Gibbons, W, Gadhamshetty, V, Ai, N and Zeng, GN 2018 Potassium chloride templated carbon preparation for supercapacitor J Power Sources 384: 360-366 DOI

Butzin, NC and Mather, WH 2018 Crosstalk between Diverse Synthetic Protein Degradation Tags in Escherichia coil Acs Synth Biol 7: 54-62 DOI

Andersen, EJ, Ali, S, Byamukama, E, Yen, Y and Nepal, MP 2018 Disease Resistance Mechanisms in Plants Genes-Basel 9: DOI

2017

Zhai, SL, Zhou, X, Zhang, H, Hause, BM, Lin, T, Liu, RX, Chen, QL, Wei, WK, Lv, DH, Wen, XH, Li, F and Wang, D 2017 Comparative epidemiology of porcine circovirus type 3 in pigs with different clinical presentations Virol J 14: DOI

Zhai, SL, Zhang, H, Chen, SN, Zhou, X, Lin, T, Liu, RX, Lv, DH, Wen, XH, Wei, WK, Wang, D and Li, F 2017 Influenza D Virus in Animal Species in Guangdong Province, Southern China Emerg Infect Dis 23: 1392-1396 DOI

Yu, JS, Hika, B, Liu, RX, Sheng, ZZ, Hause, BM, Li, F and Wang, D 2017 The Hemagglutinin-Esterase Fusion Glycoprotein Is a Primary Determinant of the Exceptional Thermal and Acid Stability of Influenza D Virus Msphere 2: DOI

Wimberly, MC, Davis, JK, Henebry, GM, Hildreth, MB, Liu, Y and Merkord, CL 2017 Integrated surveillance and modelling systems for climate-sensitive diseases: two case studies Lancet 389: 24-24 DOI

White, LJ, Ge, XJ, Brozel, VS and Subramanian, S 2017 Root isoflavonoids and hairy root transformation influence key bacterial taxa in the soybean rhizosphere Environ Microbiol 19: 1391-1406 DOI

West, TP 2017 Fungal production of the polysaccharide pullulan from a plant hydrolysate Z Naturforsch C 72: 491-495 DOI

Weng, ML, Ruhlman, TA and Jansen, RK 2017 Expansion of inverted repeat does not decrease substitution rates in Pelargonium plastid genomes New Phytol 214: 842-851 DOI

Wen, L, Lee-Marzano, S, Ortiz-Ribbing, LM, Gruver, J, Hartman, GL and Eastburn, DM 2017 Suppression of Soilborne Diseases of Soybean With Cover Crops Plant Dis 101: 1918-1928 DOI

Wang, XQ, Ohnstad, M, Nelsen, A and Nelson, E 2017 Porcine epidemic diarrhea virus does not replicate in porcine monocyte-derived dendritic cells, but activates the transcription of type I interferon and chemokine Vet Microbiol 208: 77-81 DOI

Wang, D and Ma, WJ 2017 Visualization of IAV Genomes at the Single-Cell Level Trends Microbiol 25: 781-782 DOI

Van Noort, A, Nelsen, A, Pillatzki, AE, Diel, DG, Li, F, Nelson, E and Wang, XQ 2017 Intranasal immunization of pigs with porcine reproductive and respiratory syndrome virus-like particles plus 2', 3'-cGAMP VacciGrade (TM) adjuvant exacerbates viremia after virus challenge Virol J 14: DOI 

Uddin, N, Shrestha, M, Zheng, BC, Yoon, HJ, Wang, XQ and Fan, QH 2017 Liquid Sensors Based on Enhanced Fabry-Perot Etalons Ieee Sens J 17: 7348-7354 DOI

Sinn, SM, Gibbons, WR, Brown, ML, DeRouchey, JM and Levesque, CL 2017 Evaluation of microbially enhanced soybean meal as an alternative to fishmeal in weaned pig diets Animal 11: 784-793 DOI

Schwarz, EN, Ruhlman, TA, Weng, ML, Khiyami, MA, Sabir, JSM, Hajarah, NH, Alharbi, NS, Rabah, SO and Jansen, RK 2017 Plastome-Wide Nucleotide Substitution Rates Reveal Accelerated Rates in Papilionoideae and Correlations with Genome Features Across Legume Subfamilies J Mol Evol 84: 187-203 DOI

Park, S, Ruhlman, TA, Weng, ML, Hajrah, NH, Sabir, JSM and Jansen, RK 2017 Contrasting Patterns ofNucleotide Substitution Rates Provide Insight into Dynamic Evolution of Plastid and Mitochondrial Genomes of Geranium Genome Biol Evol 9: 1766-1780 DOI

Park, B, Rutter, MT, Fenster, CB, Symonds, VV, Ungerer, MC and Townsend, JP 2017 Distributions of Mutational Effects and the Estimation of Directional Selection in Divergent Lineages of Arabidopsis thaliana Genetics 206: 2105-2117 DOI

Nepal, MP, Andersen, EJ, Neupane, S and Benson, BV 2017 Comparative Genomics of Non-TNL Disease Resistance Genes from Six Plant Species Genes-Basel 8: DOI

NandaKafle, G, Seale, T, Flint, T, Nepal, M, Venter, SN and Brozel, VS 2017 Distribution of Diverse Escherichia coli between Cattle and Pasture Microbes Environ 32: 226-233 DOI

Luckie, DB, Hoskinson, AM, Griffin, CE, Hess, AL, Price, KJ, Tawa, A and Thacker, SM 2017 Integrating Concepts in Biology Textbook Increases Learning: Assessment Triangulation Using Concept Inventory, Card Sorting, and MCAT Instruments, Followed by Longitudinal Tracking Cbe-Life Sci Educ 16: DOI

Li, WL and Yang, B 2017 Translational genomics of grain size regulation in wheat Theor Appl Genet 130: 1765-1771 DOI

Koepke, JR, Kaushik, RS, Gibbons, WR, Brown, M and Levesque, CL 2017 Evaluation of a bioprocessed soybean meal on nursery pig performance and immune status J Anim Sci 95: 5030-5039 DOI

Kanchupati, P, Wang, YF, Anower, MR, Boe, A, Hu, TM and Wu, YJ 2017 The CBF-Like Gene Family in Alfalfa: Expression Analyses and Identification of Potential Functional Homologs of Arabidopsis CBF3 Crop Sci 57: 2051-2063 DOI

Johnson, TJ, Jahandideh, A, Isaac, IC, Baldwin, EL, Muthukumarappan, K, Zhou, R and Gibbons, WR 2017 Determining the optimal nitrogen source for large-scale cultivation of filamentous cyanobacteria J Appl Phycol 29: 1-13 DOI

Jahandideh, A, Johnson, TJ, Esmaeili, N, Johnson, MD, Richardson, JW, Muthukumarappan, K, Anderson, GA, Halfmann, C, Zhou, R and Gibbons, WR 2017 Life cycle analysis of a large-scale limonene production facility utilizing filamentous N-2-fixing cyanobacteria Algal Res 23: 1-11 DOI

Isaac, IC, Wootton, SA, Johnson, TJ, Baldwin, EL, Gu, LP, Karki, B, Williams, AN, Halfmann, C, Zhu, HL, Vargas-Ramirez, JM, Zhou, RB, Wiesenborn, DP and Gibbons, WR 2017 Evaluating the efficacy of genetically engineered Escherichia coli W (ATCC 9637) to produce limonene from industrial sugar beets (Beta vulgaris L.) Ind Crop Prod 108: 248-256 DOI

Isaac, IC, Johnson, TJ, Berhow, M, Baldwin, EL, Karki, B, Woyengo, T and Gibbons, WR 2017 Evaluating the efficacy of fungal strains to stimulate glyceollin production in soybeans Mycol Prog 16: 223-230 DOI

Hoskinson, AM, Maher, JM, Bekkering, C and Ebert-May, D 2017 A Problem-Sorting Task Detects Changes in Undergraduate Biological Expertise over a Single Semester Cbe-Life Sci Educ 16: DOI

Guillermo-Lagae, R, Santha, S, Thomas, M, Zoelle, E, Stevens, J, Kaushik, RS and Dwivedi, C 2017 Antineoplastic Effects of Honokiol on Melanoma Biomed Res Int DOI

Deter, HS, Jensen, RV, Mather, WH and Butzin, NC 2017 Mechanisms for Differential Protein Production in Toxin-Antitoxin Systems Toxins 9: DOI

Datla, US, Mather, WH, Chen, S, Shoultz, IW, Tauber, UC, Jones, CN and Butzin, NC 2017 The spatiotemporal system dynamics of acquired resistance in an engineered microecology Sci Rep-Uk 7: DOI

Das, A, Kim, DW, Khadka, P, Rakwal, R and Rohila, JS 2017 Unraveling Key Metabolomic Alterations in Wheat Embryos Derived from Freshly Harvested and Water-Imbibed Seeds of Two Wheat Cultivars with Contrasting Dormancy Status Front Plant Sci 8: DOI

Damodaran, S, Westfall, CS, Kisely, BA, Jez, JM and Subramanian, S 2017 Nodule-Enriched GRETCHEN HAGEN 3 Enzymes Have Distinct Substrate Specificities and Are Important for Proper Soybean Nodule Development Int J Mol Sci 18: DOI

Dahal, B, Nandakafle, G, Perkins, L and Brozela, VS 2017 Diversity of free-Living nitrogen fixing Streptomyces in soils of the badlands of South Dakota Microbiol Res 195: 31-39 DOI 

Cao, YH, Wang, KL, Wang, XM, Gu, ZR, Ambrico, T, Gibbons, W, Fan, QH and Talukder, AA 2017 Preparation of active carbons from corn stalk for butanol vapor adsorption J Energy Chem 26: 35-41 DOI

Anower, MR, Peel, MD, Mott, IW and Wu, Y 2017 Physiological processes associated with salinity tolerance in an alfalfa half-sib family J Agron Crop Sci 203: 506-518 DOI

Anower, MR, Boe, A, Auger, D, Mott, IW, Peel, MD, Xu, L, Kanchupati, P and Wu, Y 2017 Comparative Drought Response in Eleven Diverse Alfalfa Accessions J Agron Crop Sci 203: 1-13 DOI

Alqahtani, MS, Islam, MS, Podaralla, S, Kaushik, RS, Reineke, J, Woyengo, T and Perumal, O 2017 Food Protein Based Core-Shell Nanocarriers for Oral Drug Delivery: Effect of Shell Composition on in Vitro and in Vivo Functional Performance of Zein Nanocarriers Mol Pharmaceut 14: 757-769 DOI

2016

Zhou, JN, Dudash, MR, Fenster, CB and Zimmer, EA 2016 Development of Highly Variable Microsatellite Markers for the Tetraploid Silene Stellata (Caryophyllaceae) Appl Plant Sci 4: DOI

Zhang, ZQ, Shao, LH, Chang, LQ, Cao, YM, Zhang, T, Wang, YF, Liu, YS, Zhang, P, Sun, XQ, Wu, YJ, Hu, TM and Yang, PZ 2016 Effect of rhizobia symbiosis on lignin levels and forage quality in alfalfa (Medicago sativa L.) Agr Ecosyst Environ 233: 55-59 DOI

Zhai, SL, Wei, WK, Li, XP, Wen, XH, Zhou, X, Zhang, H, Lv, DH, Li, F and Wang, D 2016 Occurrence and sequence analysis of porcine deltacoronaviruses in southern China Virol J 13: DOI

Yu, KX, Ma, XL, Sheng, ZZ, Qi, LH, Liu, CX, Wang, D, Huang, B, Li, F and Song, MX 2016 Identification of Goose-Origin Parvovirus as a Cause of Newly Emerging Beak Atrophy and Dwarfism Syndrome in Ducklings J Clin Microbiol 54: 1999-2007 DOI

West, TP 2016 Effect of nitrogen source concentration on curdlan production by Agrobacterium sp ATCC 31749 grown on prairie cordgrass hydrolysates Prep Biochem Biotech 46: 85-90 DOI

West, TP 2016 A Candida guilliermondii lysine hyperproducer capable of elevated citric acid production World J Microb Biot 32: DOI

Wang, YL, Yuan, XY, Qi, LH, Zhang, YX, Xu, HY, Yang, JX, Ai, W, Qi, WB, Liao, M, Wang, D, Song, MX and Li, F 2016 H9N2 avian influenza virus-derived natural reassortant H5N2 virus in swan containing the hemagglutinin segment from Eurasian H5 avian influenza virus with an in-frame deletion of four basic residues in the polybasic hemagglutinin cleavage site Infect Genet Evol 40: 17-20 DOI

Wang, XQ, Zhang, HM, Abel, A and Nelson, E 2016 Protein kinase R (PKR) plays a pro-viral role in porcine reproductive and respiratory syndrome virus (PRRSV) replication by modulating viral gene transcription Arch Virol 161: 327-333 DOI

Tripathi, P, Rabara, RC, Reese, RN, Miller, MA, Rohila, JS, Subramanian, S, Shen, QXJ, Morandi, D, Bucking, H, Shulaev, V and Rushton, PJ 2016 A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes Bmc Genomics 17: DOI

Paudel, B, Das, A, Tran, M, Boe, A, Palmer, NA, Sarath, G, Gonzalez-Hernandez, JL, Rushton, PJ and Rohila, JS 2016 Proteomic Responses of Switchgrass and Prairie Cordgrass to Senescence Front Plant Sci 7: DOI

O'Meara, BC, Smith, SD, Armbruster, WS, Harder, LD, Hardy, CR, Hileman, LC, Hufford, L, Litt, A, Magallon, S, Smith, SA, Stevens, PF, Fenster, CB and Diggle, PK 2016 Non-equilibrium dynamics and floral trait interactions shape extant angiosperm diversity P Roy Soc B-Biol Sci 283: DOI

Mitra, N, Cernicchiaro, N, Torres, S, Li, F and Hause, BM 2016 Metagenomic characterization of the virome associated with bovine respiratory disease in feedlot cattle identified novel viruses and suggests an etiologic role for influenza D virus J Gen Virol 97: 1771-1784 DOI

Misar, CG, Xu, L, Gates, RN, Boe, A, Johnson, PS, Schauer, CS, Rickertsen, JR and Stroup, WW 2016 Establishment and Persistence of Yellow-Flowered Alfalfa No-Till Interseeded into Crested Wheatgrass Stands Agron J 108: 141-150 DOI

Li, WL, Challa, GS, Zhu, HL and Wei, WJ 2016 Recurrence of Chromosome Rearrangements and Reuse of DNA Breakpoints in the Evolution of the Triticeae Genomes G3-Genes Genom Genet 6: 3837-3847 DOI

Johnson, TJ, Zahler, JD, Baldwin, EL, Zhou, RB and Gibbons, WR 2016 Optimizing cyanobacteria growth conditions in a sealed environment to enable chemical inhibition tests with volatile chemicals J Microbiol Meth 126: 54-59 DOI

Johnson, TJ, Jahandideh, A, Johnson, MD, Fields, KH, Richardson, JW, Muthukumarappan, K, Cao, YH, Gu, ZR, Halfmann, C, Zhou, RB and Gibbons, WR 2016 Producing next-generation biofuels from filamentous cyanobacteria: An economic feasibility analysis Algal Res 20: 218-228 DOI

Johnson, TJ, Halfmann, C, Zahler, JD, Zhou, RB and Gibbons, WR 2016 Increasing the tolerance of filamentous cyanobacteria to next-generation biofuels via directed evolution Algal Res 18: 250-256 DOI

Johnson, TJ, Gibbons, JL, Gu, LP, Zhou, RB and Gibbons, WR 2016 Molecular Genetic Improvements of Cyanobacteria to Enhance the Industrial Potential of the Microbe: A Review Biotechnol Progr 32: 1357-1371 DOI

Hao, JC, Lian, B, Zhou, RB, Liu, HF, Shi, LJ and Liu, CQ 2016 Microbial flocculant combined ferric trichloride facilitates floating aggregation of Microcystis aeruginosa for efficient removal Desalin Water Treat 57: 20483-20493 DOI

Finney, TE, Gedan, KB and Fenster, CB 2016 Allocation patterns contribute to the distributional limits of a flood tolerant ecotype of Chamaecrista fasciculata Aquat Bot 134: 31-38 DOI

Eljaki, AA, Al Kappany, YM, Grosz, DD, Smart, AJ and Hildreth, MB 2016 Molecular survey of trichostrongyle nematodes in a Bison bison herd experiencing clinical parasitism, and effects of avermectin treatment Vet Parasitol 227: 48-55 DOI

Diller, C and Fenster, CB 2016 Corolla chirality does not contribute to directed pollen movement in Hypericum perforatum (Hypericaceae): mirror image pinwheel flowers function as radially symmetric flowers in pollination Ecol Evol 6: 5076-5086 DOI

Das, A, Eldakak, M, Paudel, B, Kim, DW, Hemmati, H, Basu, C and Rohila, JS 2016 Leaf Proteome Analysis Reveals Prospective Drought and Heat Stress Response Mechanisms in Soybean Biomed Res IntDOI

Chowanadisai, W, Messerli, SM, Miller, DH, Medina, JE, Hamilton, JW, Messerli, MA and Brodsky, AS 2016 Cisplatin Resistant Spheroids Model Clinically Relevant Survival Mechanisms in Ovarian Tumors Plos One 11: DOI

Chen, Z, Liu, SN, Sun, WB, Chen, L, Yoo, DW, Li, F, Ren, SF, Guo, LH, Cong, XY, Li, J, Zhou, S, Wu, JQ, Du, YJ and Wang, JB 2016 Nuclear export signal of PRRSV NSP1 alpha is necessary for type I IFN inhibition Virology 499: 278-287 DOI

Cao, YH, Wang, KL, Wang, XM, Gu, ZR, Fan, QH, Gibbons, W, Hoefelmeyer, JD, Kharel, PR and Shrestha, M 2016 Hierarchical porous activated carbon for supercapacitor derived from corn stalk core by potassium hydroxide activation Electrochim Acta 212: 839-847 DOI

Cao, Y, Gu, Y, Wang, KL, Wang, XM, Gu, ZR, Ambrico, T, Castro, MA, Lee, J, Gibbons, W and Rice, JA 2016 Adsorption of creatinine on active carbons with nitric acid hydrothermal modification J Taiwan Inst Chem E 66: 347-356 DOI

Anower, MR, Fennell, A, Boe, A, Mott, IW, Peel, MD and Wu, YJ 2016 Physiological and molecular characterisation of lucerne (Medicago sativa L.) germplasm with improved seedling freezing tolerance Crop Pasture Sci 67: 655-665 DOI

Andersen, EJ, Ali, S, Reese, RN, Yen, Y, Neupane, S and Nepal, MP 2016 Diversity and Evolution of Disease Resistance Genes in Barley (Hordeum vulgare L.) Evol Bioinform 12: 99-108 DOI

Abdullah, CS, Li, Z, Wang, XQ and Jin, ZQ 2016 Depletion of T lymphocytes ameliorates cardiac fibrosis in streptozotocin-induced diabetic cardiomyopathy Int Immunopharmacol 39: 251-264 DOI

2015

Zhang, ZZ, Zhu, HL, Gill, BS and Li, WL 2015 Fine mapping of shattering locus Br2 reveals a putative chromosomal inversion polymorphism between the two lineages of Aegilops tauschii Theor Appl Genet 128: 745-755 DOI

Zhang, ZZ, Wei, WJ, Zhu, HL, Challa, GS, Bi, CL, Trick, HN and Li, WL 2015 W3 Is a New Wax Locus That Is Essential for Biosynthesis of beta-Diketone, Development of Glaucousness, and Reduction of Cuticle Permeability in Common Wheat Plos One 10: DOI

Yue, M, Han, XG, De Masi, L, Zhu, CH, Ma, X, Zhang, JJ, Wu, RW, Schmieder, R, Kaushik, RS, Fraser, GP, Zhao, SH, McDermott, PF, Weill, FX, Mainil, JG, Arze, C, Fricke, WF, Edwards, RA, Brisson, D, Zhang, NR, Rankin, SC and Schifferli, DM 2015 Allelic variation contributes to bacterial host specificity Nat Commun 6: DOI

Yuan, XY, Wang, YL, Yu, KX, Zhang, YX, Xu, HY, Yang, JX, Li, F and Song, MX 2015 Isolation and genetic characterization of avian influenza virus H4N6 from ducks in China Arch Virol 160: 55-59 DOI

Xu, YP, Zhang, B, Messerli, M, Randers-Pehrson, G, Hei, TK and Brenner, DJ 2015 Metabolic oxygen consumption measurement with a single-cell biosensor after particle microbeam irradiation Radiat Environ Bioph 54: 137-144 DOI

Xu, XY, Gu, LP, He, P and Zhou, RB 2015 Characterization of five putative aspartate aminotransferase genes in the N-2-fixing heterocystous cyanobacterium Anabaena sp strain PCC 7120 Microbiol-Sgm 161: 1219-1230 DOI

Wu, YS, Huang, RJ, Auger, D, Campbell, M and Yen, Y 2015 A High-amylose Modifier Locus Revealed by Analysis of a Homozygous Amylose-extender Mapping Population Crop Sci 55: 1163-1169 DOI

White, LJ, Jothibasu, K, Reese, RN, Brozel, VS and Subramanian, S 2015 Spatio Temporal Influence of Isoflavonoids on Bacterial Diversity in the Soybean Rhizosphere Mol Plant Microbe In 28: 22-29 DOI

West, TP 2015 Fungal biotransformation of crude glycerol into malic acid Z Naturforsch C 70: 165-167 DOI

Wang, XZ, Jiang, GL, Song, QJ, Cregan, PB, Scott, RA, Zhang, JP, Yen, Y and Brown, M 2015 Quantitative trait locus analysis of seed sulfur-containing amino acids in two recombinant inbred line populations of soybean Euphytica 201: 293-305 DOI

Wang, D, Lu, WX and Li, F 2015 Pharmacological intervention of HIV-1 maturation Acta Pharm Sin B 5: 493-499 DOI

Tripathi, P, Rabara, RC, Shulaev, V, Shen, QXJ and Rushton, PJ 2015 Understanding Water-Stress Responses in Soybean Using Hydroponics System A Systems Biology Perspective Front Plant Sci 6: DOI

Thomas, M, Wang, Z, Sreenivasan, CC, Hause, BM, Renukaradhya, GJ, Li, F, Francis, DH, Kaushik, RS and Khatri, M 2015 Poly I:C adjuvanted inactivated swine influenza vaccine induces heterologous protective immunity in pigs Vaccine 33: 542-548 DOI

Sreenivasan, C, Thomas, M, Sheng, ZZ, Hause, BM, Collin, EA, Knudsen, DEB, Pillatzki, A, Nelson, E, Wang, D, Kaushik, RS and Li, F 2015 Replication and Transmission of the Novel Bovine Influenza D Virus in a Guinea Pig Model J Virol 89: 11990-12001 DOI

Schmid, RB, Lehman, RM, Brozel, VS and Lundgren, JG 2015 Gut Bacterial Symbiont Diversity Within Beneficial Insects Linked to Reductions in Local Biodiversity Ann Entomol Soc Am 108: 993-999 DOI

Rinerson, CI, Scully, ED, Palmer, NA, Donze-Reiner, T, Rabara, RC, Tripathi, P, Shen, QXJ, Sattler, SE, Rohila, JS, Sarath, G and Rushton, PJ 2015 The WRKY transcription factor family and senescence in switchgrass Bmc Genomics 16: DOI

Rettedal, EA and Brozel, VS 2015 Characterizing the diversity of active bacteria in soil by comprehensive stable isotope probing of DNA and RNA with (H2O)-O-18 Microbiologyopen 4: 208-219 DOI

Ran, ZG, Shen, HG, Lang, YK, Kolb, EA, Turan, N, Zhu, LH, Ma, JJ, Bawa, B, Liu, QF, Liu, HX, Quast, M, Sexton, G, Krammer, F, Hause, BM, Christopher-Hennings, J, Nelson, EA, Richt, J, Li, F and Ma, WJ 2015 Domestic Pigs Are Susceptible to Infection with Influenza B Viruses J Virol 89: 4818-4826 DOI

Rabara, RC, Tripathi, P, Reese, RN, Rushton, DL, Alexander, D, Timko, MP, Shen, QJ and Rushton, PJ 2015 Tobacco drought stress responses reveal new targets for Solanaceae crop improvement Bmc Genomics 16: DOI

Quast, M, Sreeniyasan, C, Sexton, G, Nedland, H, Singrey, A, Fawcett, L, Miller, G, Lauer, D, Voss, S, Pollock, S, Cunha, CW, Christopher-Hennings, J, Nelson, E and Li, F 2015 Serological evidence for the presence of influenza D virus in small ruminants Vet Microbiol 180: 281-285 DOI

Nizampatnam, NR, Schreier, SJ, Damodaran, S, Adhikari, S and Subramanian, S 2015 microRNA160 dictates stage-specific auxin and cytokinin sensitivities and directs soybean nodule development Plant J 84: 140-153 DOI

Nepal, MP and Benson, BV 2015 CNL Disease Resistance Genes in Soybean and Their Evolutionary Divergence Evol Bioinform 11: DOI

Ma, XL, Sheng, ZZ, Huang, B, Qi, LH, Li, YF, Yu, KX, Liu, CX, Qin, ZM, Wang, D, Song, MX and Li, F 2015 Molecular Evolution and Genetic Analysis of the Major Capsid Protein VP1 of Duck Hepatitis A Viruses: Implications for Antigenic Stability Plos One 10: DOI

Liu, YH, Yang, ZY, Wang, XQ, Chen, JM, Yao, JZ, Song, YJ, Lin, J, Han, CH, Duan, HJ, Zhao, JC, Pan, J and Xie, J 2015 Pigeons are resistant to experimental infection with H7N9 avian influenza virus Avian Pathol 44: 342-346 DOI

Liu, AL, Li, YF, Qi, WB, Ma, XL, Yu, KX, Huang, B, Liao, M, Li, F, Pan, J and Song, MX 2015 Comparative analysis of selected innate immune-related genes following infection of immortal DF-1 cells with highly pathogenic (H5N1) and low pathogenic (H9N2) avian influenza viruses Virus Genes 50: 189-199 DOI

Karki, B, Muthukumarappan, K, Wang, YJ, Dale, B, Balan, V, Gibbons, WR and Karunanithy, C 2015 Physical characteristics of AFEX-pretreated and densified switchgrass, prairie cord grass, and corn stover Biomass Bioenerg 78: 164-174 DOI

Johnson, TJ, Hildreth, MB, Gu, LP, Zhou, RB and Gibbons, WR 2015 Testing a dual-fluorescence assay to monitor the viability of filamentous cyanobacteria J Microbiol Meth 113: 57-64 DOI

Hughes, SR, Cox, EJ, Bang, SS, Pinkelman, RJ, Lopez-Nunez, JC, Saha, BC, Qureshi, N, Gibbons, WR, Fry, MR, Moser, BR, Bischoff, KM, Liu, SQ, Sterner, DE, Butt, TR, Riedmuller, SB, Jones, MA and Riano-Herrera, NM 2015 Process for Assembly and Transformation into Saccharomyces cerevisiae of a Synthetic Yeast Artificial Chromosome Containing a Multigene Cassette to Express Enzymes That Enhance Xylose Utilization Designed for an Automated Platform Jala-J Lab Autom 20: 621-635 DOI

He, W, Pedersen, SC, Gupta, AK, Simmons, JA and Muller, R 2015 Lancet Dynamics in Greater Horseshoe Bats, Rhinolophus ferrumequinum Plos One 10: DOI

Hayashi, G, Moro, CF, Rohila, JS, Shibato, J, Kubo, A, Imanaka, T, Kimura, S, Ozawa, S, Fukutani, S, Endo, S, Ichikawa, K, Agrawal, GK, Shioda, S, Hori, M, Fukumoto, M and Rakwal, R 2015 2D-DIGE-based proteome expression changes in leaves of rice seedlings exposed to low-level gamma radiation at Iitate village, Fukushima Plant Signal Behav 10: DOI 

Figueiro, AD, Reese, N, Hernandez, JLG, Pacheco, MT, Martinelli, JA, Federizzi, LC and Delatorre, CA 2015 Reactive Oxygen Species are not Increased in Resistant Oat Genotypes Challenged by Crown Rust Isolates J Phytopathol 163: 795-806 DOI

Chintala, R, Owen, RK, Schumacher, TE, Spokas, KA, McDonald, LM, Kumar, S, Clay, DE, Malo, DD and Bleakley, B 2015 Denitrification kinetics in biomass- and biochar-amended soils of different landscape positions Environ Sci Pollut R 22: 5152-5163 DOI

Chen, KM, Xu, XY, Gu, LP, Hildreth, M and Zhou, RB 2015 Simultaneous gene inactivation and promoter reporting in cyanobacteria Appl Microbiol Biot 99: 1779-1793 DOI

Cao, YH, Wang, KL, Wanga, XM, Gu, ZR, Gibbons, W and Vu, H 2015 Adsorption of butanol vapor on active carbons with nitric acid hydrothermal modification Bioresource Technol 196: 525-532 DOI

Cao, YH, Wang, KL, Wang, XM, Gu, ZR, Gibbons, W and Vu, H 2015 Butanol vapor adsorption behavior on active carbons and zeolite crystal Appl Surf Sci 349: 1-7 DOI

Cao, YH, Gu, ZR, Muthukumarappan, K and Gibbons, W 2015 Separation of Glucosinolates From Camelina Seed Meal Via Membrane and Acidic Aluminum Oxide Column J Liq Chromatogr R T 38: 1273-1278 DOI

Bredeson, MM, Reese, RN and Lundgren, JG 2015 The effects of insecticide dose and herbivore density on tri-trophic effects of thiamethoxam in a system involving wheat, aphids, and ladybeetles Crop Prot 69: 70-76 DOI

Bredeson, MM and Lundgren, JG 2015 A Survey of the Foliar and Soil Arthropod Communities in Sunflower (Helianthus annuus) Fields of Central and Eastern South Dakota J Kansas Entomol Soc 88: 305-315 DOI

Bredeson, MM and Lundgren, JG 2015 Thiamethoxam Seed Treatments Have No Impact on Pest Numbers or Yield in Cultivated Sunflowers J Econ Entomol 108: 2665-2671 DOI

Biersbach, G, Rijal, B, Pryor, SW and Gibbons, WR 2015 Effects of Enzyme Loading, Densification, and Storage on AFEX-Pretreated Biomass for Ethanol Production Appl Biochem Biotech 177: 1530-1540 DOI